Leptospira santarosai
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
NCBI Strain Identifiers 56163
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000313175.2)
Genome Characteristics
CheckM Completeness 97.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 210
N50 Contigs 61,486 bp
Longest Contig 181,889 bp
Scaffold Count 210
N50 Scaffolds 61,486 bp
Longest Scaffold 181,889 bp
Genome Size 3,902,262 bp
Protein Count 3,673
Coding Density 84.95%
GC Percentage 41.85%
Ambiguous Bases N/A
GTDB representative GCA_000313175.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156926v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947895
Country USA
Date 2016-2-24
Genbank Assembly Accession GCA_001569265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source North America
Latitude Longitude None
Molecule Count N/A
CDS Count 3,980
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 28183
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 28183
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRG00000000.1