Leptospira noguchii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira noguchii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira noguchii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira noguchii
NCBI Strain Identifiers 56183
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000306255.2)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 593
N50 Contigs 15,809 bp
Longest Contig 54,791 bp
Scaffold Count 593
N50 Scaffolds 15,809 bp
Longest Scaffold 54,791 bp
Genome Size 4,591,546 bp
Protein Count 3,861
Coding Density 75.71%
GC Percentage 35.63%
Ambiguous Bases N/A
GTDB representative GCA_000306255.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156916v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947892
Country USA
Date 2016-2-24
Genbank Assembly Accession GCA_001569165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Louisiana;the United States
Latitude Longitude 31.25 N 91.90 W
Molecule Count N/A
CDS Count 4,143
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 28182
SSU Count 3
Submitter Chinese National Human Genome Center at Shanghai
Taxid 28182
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRB00000000.1