Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
NCBI Strain Identifiers 56142
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003046425.1)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 198
N50 Contigs 41,340 bp
Longest Contig 173,178 bp
Scaffold Count 198
N50 Scaffolds 41,340 bp
Longest Scaffold 173,178 bp
Genome Size 3,925,057 bp
Protein Count 3,482
Coding Density 82.23%
GC Percentage 40.04%
Ambiguous Bases N/A
GTDB representative GCA_003046425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156844v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947887
Country Zaire
Date 2016-2-24
Genbank Assembly Accession GCA_001568445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Belgium Congo
Latitude Longitude 4.32 S 15.18 E
Molecule Count N/A
CDS Count 3,734
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 174
SSU Count 2
Submitter Chinese National Human Genome Center at Shanghai
Taxid 174
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRV00000000.1