Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
NCBI Strain Identifiers 56646
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000244815.3)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 365
N50 Contigs 37,284 bp
Longest Contig 124,406 bp
Scaffold Count 365
N50 Scaffolds 37,284 bp
Longest Scaffold 124,406 bp
Genome Size 4,325,376 bp
Protein Count 4,029
Coding Density 83.02%
GC Percentage 40.69%
Ambiguous Bases N/A
GTDB representative GCA_000244815.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156841v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947791
Country China
Date 2016-2-24
Genbank Assembly Accession GCA_001568415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Guangdong; China
Latitude Longitude 23.08 N 113.14 E
Molecule Count N/A
CDS Count 4,330
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 28184
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 28184
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRR00000000.1