Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; sb__Klebsiella pneumoniae subsp. pneumoniae
NCBI Strain Identifiers KP48
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.78%
CheckM Strain Heterogeneity 33.33
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 98
N50 Contigs 354,978 bp
Longest Contig 854,093 bp
Scaffold Count 98
N50 Scaffolds 354,978 bp
Longest Scaffold 854,093 bp
Genome Size 5,679,902 bp
Protein Count 5,307
Coding Density 88.20%
GC Percentage 57.16%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156659v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04075657
Country Italy: Palermo
Date 2016-02-23
Genbank Assembly Accession GCA_001566595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine culture
Latitude Longitude 38.7 N 13.20 E
Molecule Count N/A
CDS Count 5,633
Refseq Category na
Seq Rel Date 2016/02/23
Spanned Gaps 0
Species Taxid 573
SSU Count 1
Submitter Istituto Superiore di Sanita
Taxid 72407
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKAB00000000.1