Listeria monocytogenes_C
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_C
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers SLCC85
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001749885.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 16
N50 Contigs 587,583 bp
Longest Contig 860,334 bp
Scaffold Count 16
N50 Scaffolds 587,583 bp
Longest Scaffold 860,334 bp
Genome Size 2,810,076 bp
Protein Count 2,747
Coding Density 90.15%
GC Percentage 38.13%
Ambiguous Bases N/A
GTDB representative GCA_001749885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SLCC85 assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3540902
Country None
Date 2016-1-29
Genbank Assembly Accession GCA_001565835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,780
Refseq Category na
Seq Rel Date 2016/01/29
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter INSTITUT PASTEUR
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 25
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYXE00000000.1