Listeria monocytogenes
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers LM6186
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 23
N50 Contigs 448,662 bp
Longest Contig 523,793 bp
Scaffold Count 23
N50 Scaffolds 448,662 bp
Longest Scaffold 523,793 bp
Genome Size 2,898,633 bp
Protein Count 2,864
Coding Density 90.04%
GC Percentage 37.85%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LM6186 assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3540897
Country None
Date 2016-1-29
Genbank Assembly Accession GCA_001565735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,899
Refseq Category na
Seq Rel Date 2016/01/29
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter INSTITUT PASTEUR
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYVG00000000.1