Streptococcus pasteurianus
Isolate HQ 5S/16S/23S 11 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pasteurianus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pasteurianus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pasteurianus
NCBI Strain Identifiers GED7275A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900478025.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 11
Contig Count 112
N50 Contigs 43,425 bp
Longest Contig 135,167 bp
Scaffold Count 76
N50 Scaffolds 68,623 bp
Longest Scaffold 150,789 bp
Genome Size 2,210,566 bp
Protein Count 2,183
Coding Density 85.93%
GC Percentage 37.37%
Ambiguous Bases N/A
GTDB representative GCA_900478025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM156358v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03956210
Country None
Date 2016-2-18
Genbank Assembly Accession GCA_001563585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,216
Refseq Category na
Seq Rel Date 2016/02/18
Spanned Gaps 36
Species Taxid 197614
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 197614
Total Gap Length 3600
Translation Table 11
tRNA Count (total) 21
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSRA00000000.1