Enterococcus_B faecium
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers VRE-1503262
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 143
N50 Contigs 39,158 bp
Longest Contig 133,393 bp
Scaffold Count 143
N50 Scaffolds 39,158 bp
Longest Scaffold 133,393 bp
Genome Size 2,979,335 bp
Protein Count 2,945
Coding Density 85.34%
GC Percentage 38.03%
Ambiguous Bases 149
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156292v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04270974
Country Sweden: Uppsala
Date 2016-2-17
Genbank Assembly Accession GCA_001562925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude 59.52 N 17.38 E
Molecule Count N/A
CDS Count 3,088
Refseq Category na
Seq Rel Date 2016/02/17
Spanned Gaps 0
Species Taxid 1352
SSU Count 1
Submitter Uppsala University
Taxid 1352
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNOX00000000.1