Enterococcus_B faecium
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers VRE-1502856
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 174
N50 Contigs 35,065 bp
Longest Contig 107,722 bp
Scaffold Count 174
N50 Scaffolds 35,065 bp
Longest Scaffold 107,722 bp
Genome Size 2,926,661 bp
Protein Count 2,898
Coding Density 86.07%
GC Percentage 38.16%
Ambiguous Bases 181
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156291v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04270971
Country Sweden: Uppsala
Date 2016-2-17
Genbank Assembly Accession GCA_001562915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude 59.52 N 17.38 E
Molecule Count N/A
CDS Count 3,031
Refseq Category na
Seq Rel Date 2016/02/17
Spanned Gaps 0
Species Taxid 1352
SSU Count 1
Submitter Uppsala University
Taxid 1352
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNOU00000000.1