Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
NCBI Strain Identifiers B75
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 200
N50 Contigs 173,832 bp
Longest Contig 459,043 bp
Scaffold Count 200
N50 Scaffolds 173,832 bp
Longest Scaffold 459,043 bp
Genome Size 5,307,950 bp
Protein Count 5,146
Coding Density 88.16%
GC Percentage 50.69%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156159v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04273100
Country United Kingdom
Date 2016-2-16
Genbank Assembly Accession GCA_001561595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 52.57 N 1.8 W
Molecule Count N/A
CDS Count 5,558
Refseq Category na
Seq Rel Date 2016/02/16
Spanned Gaps 0
Species Taxid 562
SSU Count 5
Submitter Swansea University
Taxid 562
Total Gap Length 0
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRWN00000000.1