Sulfolobus acidocaldarius
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
NCBI Strain Identifiers NG05B_C06_02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012285.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 18
N50 Contigs 183,145 bp
Longest Contig 503,533 bp
Scaffold Count 18
N50 Scaffolds 183,145 bp
Longest Scaffold 503,533 bp
Genome Size 2,255,808 bp
Protein Count 2,453
Coding Density 87.47%
GC Percentage 36.72%
Ambiguous Bases 69
GTDB representative GCA_000012285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name NG05B_C06_02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04305159
Country USA: Yellowstone National Park
Date 2016-2-11
Genbank Assembly Accession GCA_001560385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source NG05 hot spring; Norris Geyser Basin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,350
Refseq Category na
Seq Rel Date 2016/02/11
Spanned Gaps 0
Species Taxid 2285
SSU Count 2
Submitter University of Illinois at Urbana-Champaign
Taxid 2285
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPRY00000000.1