Sulfolobus acidocaldarius
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
NCBI Strain Identifiers GG12-C01-17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012285.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 10
N50 Contigs 622,346 bp
Longest Contig 630,714 bp
Scaffold Count 10
N50 Scaffolds 622,346 bp
Longest Scaffold 630,714 bp
Genome Size 2,220,644 bp
Protein Count 2,378
Coding Density 87.57%
GC Percentage 36.71%
Ambiguous Bases 70
GTDB representative GCA_000012285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name GG12_C01_17
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04305151
Country USA: Yellowstone National Park
Date 2016-2-11
Genbank Assembly Accession GCA_001560215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source GG12 hot spring; Gibbon Geyser Basin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,275
Refseq Category na
Seq Rel Date 2016/02/11
Spanned Gaps 0
Species Taxid 2285
SSU Count 0
Submitter University of Illinois at Urbana-Champaign
Taxid 2285
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPRQ00000000.1