Sulfolobus acidocaldarius
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
NCBI Strain Identifiers GG12-C01-12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012285.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 7
N50 Contigs 1,504,663 bp
Longest Contig 1,504,663 bp
Scaffold Count 5
N50 Scaffolds 1,504,663 bp
Longest Scaffold 1,504,663 bp
Genome Size 2,217,231 bp
Protein Count 2,400
Coding Density 87.48%
GC Percentage 36.69%
Ambiguous Bases 120
GTDB representative GCA_000012285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name GG12_C01_12
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04305146
Country USA: Yellowstone National Park
Date 2016-2-11
Genbank Assembly Accession GCA_001560125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source GG12 hot spring; Gibbon Geyser Basin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,279
Refseq Category na
Seq Rel Date 2016/02/11
Spanned Gaps 2
Species Taxid 2285
SSU Count 1
Submitter University of Illinois at Urbana-Champaign
Taxid 2285
Total Gap Length 23
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPRL00000000.1