Sulfolobus acidocaldarius
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus acidocaldarius
NCBI Strain Identifiers GG12-C01-04
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012285.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 9
N50 Contigs 437,558 bp
Longest Contig 576,235 bp
Scaffold Count 9
N50 Scaffolds 437,558 bp
Longest Scaffold 576,235 bp
Genome Size 2,221,964 bp
Protein Count 2,367
Coding Density 87.57%
GC Percentage 36.71%
Ambiguous Bases 46
GTDB representative GCA_000012285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name GG12_C01_04
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04305139
Country USA: Yellowstone National Park
Date 2016-2-11
Genbank Assembly Accession GCA_001559985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source GG12 hot spring; Gibbon Geyser Basin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,279
Refseq Category na
Seq Rel Date 2016/02/11
Spanned Gaps 0
Species Taxid 2285
SSU Count 2
Submitter University of Illinois at Urbana-Champaign
Taxid 2285
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPRF00000000.1