Acidithiobacillus ferrooxidans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Acidithiobacillia; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Acidithiobacillia; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans
NCBI Strain Identifiers Hel18
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000021485.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 123
N50 Contigs 59,423 bp
Longest Contig 222,655 bp
Scaffold Count 123
N50 Scaffolds 59,423 bp
Longest Scaffold 222,655 bp
Genome Size 3,109,160 bp
Protein Count 3,240
Coding Density 89.89%
GC Percentage 58.63%
Ambiguous Bases 1
GTDB representative GCA_000021485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155933v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04387837
Country None
Date 2016-2-11
Genbank Assembly Accession GCA_001559335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source flue dust
Latitude Longitude 51.554794 N 11.487617 E
Molecule Count N/A
CDS Count 3,152
Refseq Category na
Seq Rel Date 2016/02/11
Spanned Gaps 0
Species Taxid 920
SSU Count 1
Submitter TU Bergaakademie Freiberg
Taxid 920
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQRJ00000000.1