Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
NCBI Strain Identifiers FDAARGOS_149
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 1,839,644 bp
Longest Contig 1,839,644 bp
Scaffold Count 1
N50 Scaffolds 1,839,644 bp
Longest Scaffold 1,839,644 bp
Genome Size 1,839,644 bp
Protein Count 1,768
Coding Density 85.80%
GC Percentage 38.54%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM155917v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996295
Country USA:DC
Date 2018-2-5
Genbank Assembly Accession GCA_001559175.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Peripheral blood
Latitude Longitude None
Molecule Count 1
CDS Count 1,805
Refseq Category na
Seq Rel Date 2018/02/05
Spanned Gaps 0
Species Taxid 1314
SSU Count 6
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 1314
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None