Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
NCBI Strain Identifiers LT2
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,857,490 bp
Longest Contig 4,857,490 bp
Scaffold Count 2
N50 Scaffolds 4,857,490 bp
Longest Scaffold 4,857,490 bp
Genome Size 4,951,423 bp
Protein Count 4,631
Coding Density 87.17%
GC Percentage 52.24%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM155835v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996249
Country USA
Date 2018-2-23
Genbank Assembly Accession GCA_001558355.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wild type strain isolated from a natural source
Latitude Longitude None
Molecule Count 2
CDS Count 4,963
Refseq Category na
Seq Rel Date 2018/02/23
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 28901
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None