Photobacterium aquimaris
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium aquimaris
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium aquimaris
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium aquimaris
NCBI Strain Identifiers NCCB 100386
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002954455.1)
Genome Characteristics
CheckM Completeness 97.9%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 1
23S Count 5
tRNA Count 20
Contig Count 123
N50 Contigs 149,272 bp
Longest Contig 355,666 bp
Scaffold Count 123
N50 Scaffolds 149,272 bp
Longest Scaffold 355,666 bp
Genome Size 4,306,882 bp
Protein Count 3,815
Coding Density 85.00%
GC Percentage 39.49%
Ambiguous Bases N/A
GTDB representative GCA_002954455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155811v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279319
Country None
Date 2016-2-10
Genbank Assembly Accession GCA_001558115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,754
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 512643
SSU Count 12
Submitter University of Cambridge
Taxid 512643
Total Gap Length 0
Translation Table 11
tRNA Count (total) 176
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNQZ00000000.1