Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus
NCBI Strain Identifiers NCCB 53037
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (87 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 85
N50 Contigs 290,730 bp
Longest Contig 543,707 bp
Scaffold Count 85
N50 Scaffolds 290,730 bp
Longest Scaffold 543,707 bp
Genome Size 5,744,915 bp
Protein Count 5,067
Coding Density 85.09%
GC Percentage 43.93%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155801v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279321
Country None
Date 2016-2-10
Genbank Assembly Accession GCA_001558015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,032
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 29497
SSU Count 18
Submitter University of Cambridge
Taxid 29497
Total Gap Length 0
Translation Table 11
tRNA Count (total) 134
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNQX00000000.1