Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio sifiae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
NCBI Strain Identifiers CL7
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002954715.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 3
23S Count 8
tRNA Count 20
Contig Count 105
N50 Contigs 641,894 bp
Longest Contig 1,690,507 bp
Scaffold Count 105
N50 Scaffolds 641,894 bp
Longest Scaffold 1,690,507 bp
Genome Size 4,590,949 bp
Protein Count 4,133
Coding Density 88.02%
GC Percentage 38.22%
Ambiguous Bases N/A
GTDB representative GCA_002954715.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155799v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279308
Country Chile: Cachagua
Date 2016-2-10
Genbank Assembly Accession GCA_001557995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Shore seawater
Latitude Longitude 32.5847405 S 71.4515498 W
Molecule Count N/A
CDS Count 4,062
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 80852
SSU Count 18
Submitter University of Cambridge
Taxid 80852
Total Gap Length 0
Translation Table 11
tRNA Count (total) 110
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNRN00000000.1