Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio sifiae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
NCBI Strain Identifiers CL5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002954715.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 11
23S Count 7
tRNA Count 20
Contig Count 90
N50 Contigs 456,679 bp
Longest Contig 757,793 bp
Scaffold Count 90
N50 Scaffolds 456,679 bp
Longest Scaffold 757,793 bp
Genome Size 4,663,233 bp
Protein Count 4,242
Coding Density 88.03%
GC Percentage 38.23%
Ambiguous Bases N/A
GTDB representative GCA_002954715.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155791v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279306
Country Chile: Buchupureo
Date 2016-2-10
Genbank Assembly Accession GCA_001557915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Shore seawater
Latitude Longitude 36.0773222 S 72.7967518 W
Molecule Count N/A
CDS Count 4,198
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 80852
SSU Count 19
Submitter University of Cambridge
Taxid 80852
Total Gap Length 0
Translation Table 11
tRNA Count (total) 112
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNRL00000000.1