Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio sifiae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio wodanis
NCBI Strain Identifiers CL1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002954715.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 15
23S Count 6
tRNA Count 20
Contig Count 71
N50 Contigs 653,986 bp
Longest Contig 1,001,938 bp
Scaffold Count 71
N50 Scaffolds 653,986 bp
Longest Scaffold 1,001,938 bp
Genome Size 4,565,725 bp
Protein Count 4,102
Coding Density 88.04%
GC Percentage 38.27%
Ambiguous Bases N/A
GTDB representative GCA_002954715.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155778v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279303
Country Chile: Estacion las Cruces
Date 2016-2-10
Genbank Assembly Accession GCA_001557785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Shore seawater
Latitude Longitude 33.4998577 S 71.6379819 W
Molecule Count N/A
CDS Count 4,052
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 80852
SSU Count 23
Submitter University of Cambridge
Taxid 80852
Total Gap Length 0
Translation Table 11
tRNA Count (total) 117
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNRI00000000.1