Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio jasicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio harveyi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio harveyi
NCBI Strain Identifiers MOR3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000400365.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 3
23S Count 16
tRNA Count 20
Contig Count 74
N50 Contigs 281,553 bp
Longest Contig 1,031,405 bp
Scaffold Count 74
N50 Scaffolds 281,553 bp
Longest Scaffold 1,031,405 bp
Genome Size 5,952,196 bp
Protein Count 5,336
Coding Density 86.75%
GC Percentage 45.04%
Ambiguous Bases N/A
GTDB representative GCA_000400365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155777v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279314
Country Morocco: Legzira
Date 2016-2-10
Genbank Assembly Accession GCA_001557775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Shore seawater
Latitude Longitude 29.4469435 N 10.1169459 W
Molecule Count N/A
CDS Count 5,404
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 669
SSU Count 11
Submitter University of Cambridge
Taxid 669
Total Gap Length 0
Translation Table 11
tRNA Count (total) 121
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNRD00000000.1