Vibrio splendidus_F
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus_F
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio splendidus
NCBI Strain Identifiers MOR2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001557875.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.24%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 13
23S Count 8
tRNA Count 20
Contig Count 63
N50 Contigs 586,143 bp
Longest Contig 1,069,629 bp
Scaffold Count 63
N50 Scaffolds 586,143 bp
Longest Scaffold 1,069,629 bp
Genome Size 5,253,425 bp
Protein Count 4,598
Coding Density 86.14%
GC Percentage 44.25%
Ambiguous Bases N/A
GTDB representative GCA_001557875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155776v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279313
Country Morocco: Legzira
Date 2016-2-10
Genbank Assembly Accession GCA_001557765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Shore seawater
Latitude Longitude 29.4469435 N 10.1169459 W
Molecule Count N/A
CDS Count 4,564
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 29497
SSU Count 21
Submitter University of Cambridge
Taxid 29497
Total Gap Length 0
Translation Table 11
tRNA Count (total) 135
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNRE00000000.1