Micrococcus luteus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Micrococcus; s__Micrococcus luteus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Micrococcus; s__Micrococcus luteus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Micrococcus; s__Micrococcus luteus
NCBI Strain Identifiers CCH3-E2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000023205.1)
Genome Characteristics
CheckM Completeness 93.95%
CheckM Contamination 2.75%
CheckM Strain Heterogeneity 87.5
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 362
N50 Contigs 11,821 bp
Longest Contig 53,818 bp
Scaffold Count 362
N50 Scaffolds 11,821 bp
Longest Scaffold 53,818 bp
Genome Size 2,404,818 bp
Protein Count 2,292
Coding Density 90.46%
GC Percentage 73.19%
Ambiguous Bases N/A
GTDB representative GCA_000023205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155694v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04299479
Country USA: Ohio
Date 2016-2-10
Genbank Assembly Accession GCA_001556945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hospital shower hose biofilm
Latitude Longitude 40.107208420793235 N 82.18359231948853 W
Molecule Count N/A
CDS Count 2,249
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 1270
SSU Count 1
Submitter U.S. Environmental Protection Agency
Taxid 1270
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSKC00000000.1