Streptococcus sp001556435
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp001556435
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. CCH5-D3
NCBI Strain Identifiers CCH5-D3
GTDB Type Material Designation not type material
GTDB Representative of Species True (22 genomes in species cluster)
Genome Characteristics
CheckM Completeness 95.85%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 178
N50 Contigs 72,882 bp
Longest Contig 173,361 bp
Scaffold Count 178
N50 Scaffolds 72,882 bp
Longest Scaffold 173,361 bp
Genome Size 2,108,505 bp
Protein Count 2,052
Coding Density 88.47%
GC Percentage 39.84%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155643v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04299447
Country USA: Ohio
Date 2016-2-10
Genbank Assembly Accession GCA_001556435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hospital shower hose biofilm
Latitude Longitude 40.107208420793235 N 82.18359231948853 W
Molecule Count N/A
CDS Count 2,035
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 1768764
SSU Count 1
Submitter U.S. Environmental Protection Agency
Taxid 1768764
Total Gap Length 0
Translation Table 11
tRNA Count (total) 30
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSIW00000000.1