Blastomonas delafieldii_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Blastomonas; s__Blastomonas delafieldii_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Acidovorax; s__Acidovorax delafieldii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Acidovorax; s__Acidovorax delafieldii
NCBI Strain Identifiers CCH4-A2
GTDB Type Material Designation not type material
GTDB Representative of Species True (22 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.81%
CheckM Contamination 1.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 150
N50 Contigs 47,754 bp
Longest Contig 201,634 bp
Scaffold Count 150
N50 Scaffolds 47,754 bp
Longest Scaffold 201,634 bp
Genome Size 4,007,395 bp
Protein Count 3,811
Coding Density 90.30%
GC Percentage 64.44%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155577v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04299412
Country USA: Ohio
Date 2016-2-10
Genbank Assembly Accession GCA_001555775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hospital shower hose biofilm
Latitude Longitude 40.107208420793235 N 82.18359231948853 W
Molecule Count N/A
CDS Count 3,815
Refseq Category representative genome
Seq Rel Date 2016/02/10
Spanned Gaps 0
Species Taxid 47920
SSU Count 1
Submitter U.S. Environmental Protection Agency
Taxid 47920
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSHP00000000.1