Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AU10836
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 124
N50 Contigs 111,223 bp
Longest Contig 233,425 bp
Scaffold Count 124
N50 Scaffolds 111,223 bp
Longest Scaffold 233,425 bp
Genome Size 6,536,502 bp
Protein Count 6,205
Coding Density 89.31%
GC Percentage 66.20%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155523v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04436487
Country USA
Date 2016-2-9
Genbank Assembly Accession GCA_001555235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 6,300
Refseq Category na
Seq Rel Date 2016/02/09
Spanned Gaps 0
Species Taxid 287
SSU Count 2
Submitter University of Michigan
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRZE00000000.1