Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Proteus; s__Proteus mirabilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
NCBI Strain Identifiers GED7834
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160755.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 18
Contig Count 95
N50 Contigs 114,898 bp
Longest Contig 263,185 bp
Scaffold Count 62
N50 Scaffolds 192,485 bp
Longest Scaffold 556,339 bp
Genome Size 3,899,263 bp
Protein Count 3,525
Coding Density 85.25%
GC Percentage 38.67%
Ambiguous Bases N/A
GTDB representative GCA_000160755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155352v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03948578
Country None
Date 2016-2-9
Genbank Assembly Accession GCA_001553525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 3,537
Refseq Category na
Seq Rel Date 2016/02/09
Spanned Gaps 33
Species Taxid 584
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 584
Total Gap Length 3300
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSGS00000000.1