Veillonella parvula_A
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_C; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella parvula_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella parvula
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella parvula
NCBI Strain Identifiers DNF00876
GTDB Type Material Designation not type material
GTDB Representative of Species True (13 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 83
N50 Contigs 60,665 bp
Longest Contig 120,404 bp
Scaffold Count 41
N50 Scaffolds 109,450 bp
Longest Scaffold 335,328 bp
Genome Size 2,050,442 bp
Protein Count 1,849
Coding Density 87.09%
GC Percentage 38.63%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155333v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04324899
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001553335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,839
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 42
Species Taxid 29466
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 29466
Total Gap Length 4200
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSDP00000000.1