Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_C; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar
NCBI Strain Identifiers DNF00926
GTDB Type Material Designation not type material
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 104
N50 Contigs 64,367 bp
Longest Contig 115,966 bp
Scaffold Count 58
N50 Scaffolds 179,344 bp
Longest Scaffold 228,436 bp
Genome Size 2,045,490 bp
Protein Count 1,906
Coding Density 86.08%
GC Percentage 38.57%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155331v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04324900
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001553315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,886
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 46
Species Taxid 39778
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 39778
Total Gap Length 4600
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSDO00000000.1