Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella amnii
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella amnii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella amnii
NCBI Strain Identifiers DNF00307
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000378745.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 155
N50 Contigs 52,862 bp
Longest Contig 202,717 bp
Scaffold Count 112
N50 Scaffolds 67,916 bp
Longest Scaffold 202,717 bp
Genome Size 2,378,563 bp
Protein Count 2,063
Coding Density 87.16%
GC Percentage 36.51%
Ambiguous Bases N/A
GTDB representative GCA_000378745.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155322v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04324898
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001553225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,064
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 43
Species Taxid 419005
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 419005
Total Gap Length 4300
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSDL00000000.1