Leptotrichia wadei
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Leptotrichiaceae; g__Leptotrichia; s__Leptotrichia wadei
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Leptotrichiaceae; g__Leptotrichia; s__Leptotrichia wadei
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Leptotrichiaceae; g__Leptotrichia; s__Leptotrichia wadei
NCBI Strain Identifiers KA00185
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000373345.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.7%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 16
Contig Count 180
N50 Contigs 34,256 bp
Longest Contig 100,589 bp
Scaffold Count 126
N50 Scaffolds 56,177 bp
Longest Scaffold 158,538 bp
Genome Size 2,377,589 bp
Protein Count 2,262
Coding Density 84.88%
GC Percentage 29.43%
Ambiguous Bases N/A
GTDB representative GCA_000373345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155304v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03854666
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001553045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,244
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 54
Species Taxid 157687
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 157687
Total Gap Length 5400
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSDD00000000.1