Aerococcus christensenii
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Aerococcaceae; g__Aerococcus; s__Aerococcus christensenii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Aerococcaceae; g__Aerococcus; s__Aerococcus christensenii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Aerococcaceae; g__Aerococcus; s__Aerococcus christensenii
NCBI Strain Identifiers KA00635
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001543105.1)
Genome Characteristics
CheckM Completeness 98.53%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 107
N50 Contigs 37,522 bp
Longest Contig 96,864 bp
Scaffold Count 60
N50 Scaffolds 90,206 bp
Longest Scaffold 270,002 bp
Genome Size 1,710,611 bp
Protein Count 1,627
Coding Density 86.04%
GC Percentage 38.81%
Ambiguous Bases N/A
GTDB representative GCA_001543105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM155275v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842031
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001552755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,632
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 47
Species Taxid 87541
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 87541
Total Gap Length 4700
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSCQ00000000.1