Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium vaccae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium vaccae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium vaccae; x__Mycolicibacterium vaccae NBRC 14118 = CIP 105934
NCBI Strain Identifiers NBRC 14118
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 370
N50 Contigs 30,126 bp
Longest Contig 130,283 bp
Scaffold Count 370
N50 Scaffolds 30,126 bp
Longest Scaffold 130,283 bp
Genome Size 6,168,821 bp
Protein Count 6,129
Coding Density 92.68%
GC Percentage 68.55%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155271v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046508
Country None
Date 2016-02-06
Genbank Assembly Accession GCA_001552715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,081
Refseq Category na
Seq Rel Date 2016/02/06
Spanned Gaps 0
Species Taxid 1810
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1223499
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCRS00000000.1