Rhodococcus erythropolis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Rhodococcus; s__Rhodococcus erythropolis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus erythropolis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus erythropolis; x__Rhodococcus erythropolis NBRC 15567
NCBI Strain Identifiers NBRC 15567
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (27 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.85%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 67
N50 Contigs 200,338 bp
Longest Contig 1,368,266 bp
Scaffold Count 67
N50 Scaffolds 200,338 bp
Longest Scaffold 1,368,266 bp
Genome Size 6,588,929 bp
Protein Count 6,194
Coding Density 91.74%
GC Percentage 62.40%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155259v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046519
Country None
Date 2016-2-6
Genbank Assembly Accession GCA_001552595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,096
Refseq Category na
Seq Rel Date 2016/02/06
Spanned Gaps 0
Species Taxid 1833
SSU Count 3
Submitter National Institute of Technology and Evaluation
Taxid 1219014
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCRM00000000.1