Rhodococcus hoagii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Rhodococcus; s__Rhodococcus hoagii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus hoagii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus hoagii; x__Rhodococcus hoagii NBRC 101255 = C 7
NCBI Strain Identifiers NBRC 101255
GTDB Type Material Designation type strain of heterotypic synonym
GTDB Representative of Species False (representative is GCA_001646645.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 251,868 bp
Longest Contig 598,553 bp
Scaffold Count 48
N50 Scaffolds 251,868 bp
Longest Scaffold 598,553 bp
Genome Size 5,196,588 bp
Protein Count 4,902
Coding Density 91.58%
GC Percentage 68.79%
Ambiguous Bases N/A
GTDB representative GCA_001646645.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155257v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046489
Country None
Date 2016-2-6
Genbank Assembly Accession GCA_001552575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,825
Refseq Category na
Seq Rel Date 2016/02/06
Spanned Gaps 0
Species Taxid 43767
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1219013
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material assembly from synonym type material
Unspanned Gaps 0
Version Status latest
WGS Master BCRL00000000.1