Agrobacterium pusense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Agrobacterium; s__Agrobacterium pusense
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Agrobacterium; s__Agrobacterium tumefaciens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Agrobacterium; x__Agrobacterium tumefaciens complex; s__Agrobacterium tumefaciens
NCBI Strain Identifiers S33
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900102105.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 2
N50 Contigs 2,983,661 bp
Longest Contig 2,983,661 bp
Scaffold Count 2
N50 Scaffolds 2,983,661 bp
Longest Scaffold 2,983,661 bp
Genome Size 5,481,595 bp
Protein Count 5,186
Coding Density 88.02%
GC Percentage 59.19%
Ambiguous Bases N/A
GTDB representative GCA_900102105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM155189v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04423123
Country China: Jinan
Date 2016-2-8
Genbank Assembly Accession GCA_001551895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 5,207
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 0
Species Taxid 358
SSU Count 4
Submitter Shandong University
Taxid 358
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None