Undefined name (Failed Quality Check)
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. 96-12
NCBI Strain Identifiers 96-12
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.14%
CheckM Contamination 2.13%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1,875
N50 Contigs 8,672 bp
Longest Contig 77,309 bp
Scaffold Count 1,875
N50 Scaffolds 8,672 bp
Longest Scaffold 77,309 bp
Genome Size 10,080,713 bp
Protein Count 10,278
Coding Density 87.16%
GC Percentage 70.94%
Ambiguous Bases N/A
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155031v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04441028
Country Egypt
Date 2016-02-05
Genbank Assembly Accession GCA_001550315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 10,056
Refseq Category na
Seq Rel Date 2016/02/05
Spanned Gaps 0
Species Taxid 1789652
SSU Count 7
Submitter University of Florida
Taxid 1789652
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRTS00000000.1