Undefined name (Failed Quality Check)
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces scabiei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces scabiei
NCBI Strain Identifiers 84-34
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.14%
CheckM Contamination 1.03%
CheckM Strain Heterogeneity 50.0
5S Count 7
16S Count 6
23S Count 7
tRNA Count 20
Contig Count 1,650
N50 Contigs 10,930 bp
Longest Contig 110,042 bp
Scaffold Count 1,650
N50 Scaffolds 10,930 bp
Longest Scaffold 110,042 bp
Genome Size 9,992,374 bp
Protein Count 9,982
Coding Density 86.76%
GC Percentage 71.24%
Ambiguous Bases N/A
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM155024v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04440839
Country USA: upstate New York
Date 2016-02-05
Genbank Assembly Accession GCA_001550245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 9,832
Refseq Category na
Seq Rel Date 2016/02/05
Spanned Gaps 0
Species Taxid 1930
SSU Count 8
Submitter University of Florida
Taxid 1930
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRTN00000000.1