Xylella fastidiosa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
NCBI Strain Identifiers CVC0256
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000767565.1)
Genome Characteristics
CheckM Completeness 98.91%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 128
N50 Contigs 116,891 bp
Longest Contig 340,191 bp
Scaffold Count 128
N50 Scaffolds 116,891 bp
Longest Scaffold 340,191 bp
Genome Size 2,702,144 bp
Protein Count 2,739
Coding Density 82.55%
GC Percentage 52.51%
Ambiguous Bases N/A
GTDB representative GCA_000767565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name XFAS002-SEQ-2-ASM-1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03862121
Country Brazil: Sao Paulo State; Colina
Date 2016-2-5
Genbank Assembly Accession GCA_001549745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude None
Molecule Count 4
CDS Count 2,656
Refseq Category na
Seq Rel Date 2016/02/05
Spanned Gaps 0
Species Taxid 2371
SSU Count 2
Submitter cBio Corp
Taxid 2371
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRVF00000000.1