Pseudomonas_E sp001547895
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp001547895
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. St29
NCBI Strain Identifiers St29
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001547895.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 2.63%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 6,833,117 bp
Longest Contig 6,833,117 bp
Scaffold Count 1
N50 Scaffolds 6,833,117 bp
Longest Scaffold 6,833,117 bp
Genome Size 6,833,117 bp
Protein Count 6,117
Coding Density 87.82%
GC Percentage 63.32%
Ambiguous Bases N/A
GTDB representative GCA_001547895.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM154791v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00018366
Country Japan:Ibaraki:Higashiibaraki
Date 2015-3-19
Genbank Assembly Accession GCA_001547915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 36.286889 N 140.424528 E
Molecule Count 1
CDS Count 6,147
Refseq Category na
Seq Rel Date 2015/03/19
Spanned Gaps 0
Species Taxid 1500687
SSU Count 6
Submitter National Institute of Agrobiological Sciences
Taxid 1500687
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None