Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes JRS4
NCBI Strain Identifiers JRS4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 1,811,124 bp
Longest Contig 1,811,124 bp
Scaffold Count 1
N50 Scaffolds 1,811,124 bp
Longest Scaffold 1,811,124 bp
Genome Size 1,811,124 bp
Protein Count 1,740
Coding Density 85.72%
GC Percentage 38.64%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM154771v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00061011
Country None
Date 2015-4-4
Genbank Assembly Accession GCA_001547715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,762
Refseq Category na
Seq Rel Date 2015/04/04
Spanned Gaps 0
Species Taxid 1314
SSU Count 6
Submitter Tokyo Medical and Dental University
Taxid 1150773
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None