Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers VRE-1403355
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 1.5%
CheckM Strain Heterogeneity 100.0
5S Count 6
16S Count 3
23S Count 5
tRNA Count 20
Contig Count 241
N50 Contigs 26,194 bp
Longest Contig 97,272 bp
Scaffold Count 241
N50 Scaffolds 26,194 bp
Longest Scaffold 97,272 bp
Genome Size 3,145,633 bp
Protein Count 3,202
Coding Density 85.07%
GC Percentage 37.79%
Ambiguous Bases 255
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154723v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04270957
Country Sweden: Uppsala
Date 2016-2-2
Genbank Assembly Accession GCA_001547235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude 59.52 N 17.38 E
Molecule Count N/A
CDS Count 3,295
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 0
Species Taxid 1352
SSU Count 3
Submitter Uppsala University
Taxid 1352
Total Gap Length 0
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNML00000000.1