Streptococcus sp000187445
Isolate HQ 5S/16S/23S 12 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp000187445
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers GED7778A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000187445.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 12
Contig Count 135
N50 Contigs 45,666 bp
Longest Contig 164,115 bp
Scaffold Count 78
N50 Scaffolds 110,470 bp
Longest Scaffold 215,525 bp
Genome Size 2,103,587 bp
Protein Count 1,972
Coding Density 86.08%
GC Percentage 39.78%
Ambiguous Bases N/A
GTDB representative GCA_000187445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154683v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03956211
Country None
Date 2016-3-4
Genbank Assembly Accession GCA_001546835.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,999
Refseq Category na
Seq Rel Date 2016/03/04
Spanned Gaps 57
Species Taxid 1304
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1304
Total Gap Length 5700
Translation Table 11
tRNA Count (total) 21
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQS00000000.2