Streptococcus oralis_BA
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis_BA
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mitis
NCBI Strain Identifiers CMW7705B
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002860905.1)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 110
N50 Contigs 36,921 bp
Longest Contig 92,855 bp
Scaffold Count 55
N50 Scaffolds 106,867 bp
Longest Scaffold 160,188 bp
Genome Size 1,902,827 bp
Protein Count 1,820
Coding Density 87.15%
GC Percentage 39.98%
Ambiguous Bases N/A
GTDB representative GCA_002860905.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154679v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03956209
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,921
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 55
Species Taxid 28037
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 28037
Total Gap Length 5500
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQR00000000.1