Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers PSS_7736
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 40
N50 Contigs 108,407 bp
Longest Contig 239,035 bp
Scaffold Count 27
N50 Scaffolds 157,447 bp
Longest Scaffold 286,457 bp
Genome Size 2,142,748 bp
Protein Count 2,115
Coding Density 88.70%
GC Percentage 35.23%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154678v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03956189
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urinary tract
Latitude Longitude None
Molecule Count N/A
CDS Count 2,170
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 13
Species Taxid 1311
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 1311
Total Gap Length 1300
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQQ00000000.1