Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers PSS_7678
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 57
N50 Contigs 80,641 bp
Longest Contig 243,280 bp
Scaffold Count 42
N50 Scaffolds 91,885 bp
Longest Scaffold 260,419 bp
Genome Size 1,989,975 bp
Protein Count 1,957
Coding Density 88.52%
GC Percentage 35.26%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154675v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03950349
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urinary tract
Latitude Longitude None
Molecule Count N/A
CDS Count 2,011
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 15
Species Taxid 1311
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 1311
Total Gap Length 1500
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQO00000000.1