Staphylococcus aureus
Isolate HQ 16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers PSS7673
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 98.92%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 20.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 15
Contig Count 204
N50 Contigs 30,244 bp
Longest Contig 78,997 bp
Scaffold Count 103
N50 Scaffolds 87,860 bp
Longest Scaffold 208,887 bp
Genome Size 2,761,731 bp
Protein Count 2,568
Coding Density 82.59%
GC Percentage 32.54%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154660v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03948579
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001546605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude None
Molecule Count N/A
CDS Count 2,869
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 101
Species Taxid 1280
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1280
Total Gap Length 10100
Translation Table 11
tRNA Count (total) 23
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQH00000000.1